Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919587.1_cds_XP_016468769.1_61370
CDS Infomation

[gene=LOC107791257] [db_xref=GeneID:107791257] [protein=26S protease regulatory subunit 6B homolog] [protein_id=XP_016468769.1] [location=join(19470..19949,21911..22141,23067..23225,23317..23469,23670..23753,23921..24055)] [gbkey=CDS]
Sequence

ATGGCAACACCAATGGTTCTCGATCCAAAACCCTTACCGGAGGCACCATCGACCCGACCC
GACCCATATATACAGGACGTTCTTTCCGACGGCGAAGATGACCTCTACGCCCGCCTAAAA
TCTCTTCAACGGCAGCTGGAATTCATCGAGATCCAAGAGGAATATGTGAAGGACGAGCTG
AAAAATCTCCGGCGAGAACACTTACGGGCACAGGAAGAAGTCAAACGGATTCAATCGGTG
CCGTTAGTAATCGGTCAGTTCATGGAGATGATTGATACGAATAACGCTATTGTGGGCTCC
ACTACGGGATCTAATTACTACGTTAGAATACTCAGCACTATTAATCGGGAGCTACTTAAA
CCCTCGGCTTCTGTGGCCTTGCATCGTCACTCGAATGCGCTTGTTGATGTTTTACCTCCT
GAGGCTGATTCGAGTATTTCTCTGCTTAGCCAATCGGAGAAACCTGATGTTACCTATAGT
GATATTGGAGGATGTGACATACAAAAGCAGGAAATCCGTGAGGCTGTTGAGTTACCTCTG
ACTCATCACGAGTTGTACAAGCAGATTGGTATAGATCCTCCCCGTGGTGTCTTGCTTTAT
GGTCCACCAGGTACCGGGAAAACTATGCTTGCAAAGGCTGTCGCTCATCACACTACTGCT
GCCTTCATAAGGGTTGTTGGCTCAGAATTTGTTCAGAAGTACTTGGGTGAGGGTCCTCGA
ATGGTTCGTGATGTCTTTCGCCTTGCCAAAGAAAATGCTCCTGCAATTATATTTATTGAT
GAGGTAGATGCAATTGCAACTGCCAGGTTTGATGCTCAGACTGGAGCTGATAGGGAGGTC
CAGCGTATCCTCATGGAGTTGCTGAATCAGATGGATGGATTTGACCAGACCGTGAATGTG
AAAGTTATTATGGCAACTAATAGAGCTGATACTTTGGATCCTGCACTTTTGCGTCCTGGA
AGGCTTGATCGGAAGATTGAATTTCCTTTGCCTGATAGGCGTCAAAAGAGGCTTGTTTTT
CAGGTCTGCACTGCTAAGATGAACTTAGGTGATGAGGTCGACTTGGAAGATTATGTTTCT
CGCCCTGATAAAATTAGTGCTGCTGAGATTTCAGCTATTTGTCAGGAAGCAGGTATGCAT
GCAGTGCGAAAGAATCGATATGTCATACTCCCCAAGGACTTTGAAAAGGGCTACAGGACC
AATGTGAAGAAGCCTGACACTGACTTTGAATTCTACAAGTGA

Peptide Sequence

PEP ID

XP_016468769.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tabacum]
Sequence

MATPMVLDPKPLPEAPSTRPDPYIQDVLSDGEDDLYARLKSLQRQLEFIEIQEEYVKDEL
KNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDTNNAIVGSTTGSNYYVRILSTINRELLK
PSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYSDIGGCDIQKQEIREAVELPL
THHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPR
MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS
RPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK

Transcript Sequence

Gene sequence data has not been registered.